Genomic Science Program
U.S. Department of Energy | Office of Science | Biological and Environmental Research Program

Research Publications

This bibliography contains publications from research funded by the Genomic Science Program. Most publications are from FY 2021 and beyond, though older publications appear in some cases. If you are a GSP-funded researcher and don’t see your publications listed below, contact Marissa Mills ( to get your publications added.


202110.1016/j.bbrc.2021.02.046Abdelhamid, A. G. and N. K. El-DougdougComparative genomics of the gut commensal Bifidobacterium bifidum reveals adaptation to carbohydrate utilizationBiochemical and Biophysical Research Communications
202110.21203/ Elizabeth, H.-W., M.-S. David, A. Chanaka Roshan, D. Crissa, H. Kathleen, A. T. Gerald, S. Brian, P. D. Stephen and F. D. MarkAccurate Determination of Genotypic Variance of Cell Wall Characteristics of a Populus trichocarpa Pedigree Using High-Throughput Pyrolysis-Molecular Beam Mass SpectrometryBiotechnology for Biofuels
202110.1128/MRA.01411-20Ateba, T. P., K. A. Alayande and M. MwanzaMetagenomes and Assembled Genomes from Diarrhea-Affected Cattle (Bos taurus)Microbiology Resource Announcements
202110.1016/j.rhisph.2021.100342Babalola, O. O., O. A. Fasusi, A. E. Amoo and A. S. AyangbenroGenomic analysis of a Pseudomonas strain with multiple plant growth promoting propertiesRhizosphere
202110.1128/MRA.00029-21Babalola, O. O., O. A. Fasusi, A. E. Amoo and A. S. AyangbenroDraft Genomic Analysis of Pseudomonas sp. Strain OA3, a Potential Plant Growth-Promoting Rhizospheric BacteriumMicrobiology Resource Announcements
202110.1128/MRA.00954-20Babalola, O. O., R. R. Molefe and A. E. AmooMetagenome Assembly and Metagenome-Assembled Genome Sequences from the Rhizosphere of Maize Plants in Mafikeng, South AfricaMicrobiology Resource Announcements
202110.1016/j.scitotenv.2020.144429Bhatia, S. K., S. S. Jagtap, A. A. Bedekar, R. K. Bhatia, K. Rajendran, A. Pugazhendhi, C. V. Rao, A. E. Atabani, G. Kumar and Y.-H. YangRenewable biohydrogen production from lignocellulosic biomass using fermentation and integration of systems with other energy generation technologiesScience of The Total Environment
202110.1128/MRA.00884-20Bhattacharjee, A., L. N. Anderson, T. Alfaro, A. Porras-Alfaro, A. Jumpponen, K. S. Hofmockel, J. K. Jansson, C. R. Anderton and W. C. NelsonDraft Genome Sequence of Fusarium sp. Strain DS 682, a Novel Fungal Isolate from the Grass RhizosphereMicrobiology Resource Announcements
202110.1186/s40168-020-00983-xBlaustein, R. A., L.-M. Michelitsch, A. J. Glawe, H. Lee, S. Huttelmaier, N. Hellgeth, S. Ben Maamar and E. M. HartmannToothbrush microbiomes feature a meeting ground for human oral and environmental microbiotaMicrobiome
202110.1128/MRA.01485-20Borre, I. and E. C. SonnenscheinDraft Genome Sequences of Nine Environmental Bacterial Isolates Colonizing PlasticMicrobiology Resource Announcements
202110.1128/MRA.01427-20Bridges, C. M., M. C. Nelson, J. Graf and D. J. GageDraft Genome Sequences of Dysgonomonas sp. Strains BGC7 and HGC4, Isolated from the Hindgut of a Lower TermiteMicrobiology Resource Announcements
202110.1016/j.jpdc.2020.11.006Brunn, M., N. Himthani, G. Biros, M. Mehl and A. MangFast GPU 3D diffeomorphic image registrationJournal of Parallel and Distributed Computing
202110.1073/pnas.2022982118Busta, L., E. Schmitz, D. K. Kosma, J. C. Schnable and E. B. CahoonA co-opted steroid synthesis gene, maintained in sorghum but not maize, is associated with a divergence in leaf wax chemistryProceedings of the National Academy of Sciences
202110.1137/19M129961XChen, C., S. Reiz, C. D. Yu, H.-J. Bungartz and G. BirosFast Approximation of the Gauss--Newton Hessian Matrix for the Multilayer PerceptronSIAM Journal on Matrix Analysis and Applications
202110.1088/1748-9326/abd7afChen, L., D. Debnath, J. Zhong, K. Ferin, A. VanLoocke and M. KhannaThe economic and environmental costs and benefits of the renewable fuel standardEnvironmental Research Letters
202110.1021/acs.est.0c06133Chen, L., E. Blanc-Betes, T. W. Hudiburg, D. Hellerstein, S. Wallander, E. H. DeLucia and M. KhannaAssessing the Returns to Land and Greenhouse Gas Savings from Producing Energy Crops on Conservation Reserve Program LandEnvironmental Science & Technology
202110.1002/jrs.6056Cupil-Garcia, V., P. Strobbia, B. M. Crawford, H.-N. Wang, H. Ngo, Y. Liu and T. Vo-DinhPlasmonic nanoplatforms: From surface-enhanced Raman scattering sensing to biomedical applicationsJournal of Raman Spectroscopy
202110.1007/s11120-020-00806-yDahlgren, K. K., C. Gates, T. Lee and J. C. CameronProximity-based proteomics reveals the thylakoid lumen proteome in the cyanobacterium Synechococcus sp. PCC 7002Photosynthesis Research
202110.1016/j.agee.2020.107150De Antoni Migliorati, M., W. J. Parton, M. J. Bell, W. Wang and P. R. GraceSoybean fallow and nitrification inhibitors: Strategies to reduce N2O emission intensities and N losses in Australian sugarcane cropping systemsAgriculture, Ecosystems & Environment
202110.1111/pce.13872Ding, N., R. Huertas, I. Torres-Jerez, W. Liu, B. Watson, W.-R. Scheible and M. UdvardiTranscriptional, metabolic, physiological and developmental responses of switchgrass to phosphorus limitationPlant, Cell & Environment
202110.1039/D0AN02022BDo, H., S.-R. Kwon, S. Baek, C. S. Madukoma, M. K. Smiley, L. E. Dietrich, J. D. Shrout and P. W. BohnRedox cycling-based detection of phenazine metabolites secreted from Pseudomonas aeruginosa in nanopore electrode arraysAnalyst
202110.1093/femsyr/foab002Domenzain, I., F. Li, E. J. Kerkhoven and V. SiewersEvaluating accessibility, usability and interoperability of genome-scale metabolic models for diverse yeasts speciesFEMS Yeast Research
202110.1371/journal.pone.0240390Dong, H., L. V. Clark, X. Jin, K. Anzoua, L. Bagmet, P. Chebukin, E. Dzyubenko, N. Dzyubenko, B. K. Ghimire, K. Heo, D. A. Johnson, H. Nagano, A. Sabitov, J. Peng, T. Yamada, J. H. Yoo, C. Y. Yu, H. Zhao, S. P. Long and E. J. SacksManaging flowering time in Miscanthus and sugarcane to facilitate intra- and intergeneric crossesPLOS ONE
202110.1128/MRA.00864-20Doyle, D. A., K. E. Duncan and R. S. TannerGenome Sequence of Clostridium sp. Strain P21, a CO-Fermenting Acetogen Isolated from Old HayMicrobiology Resource Announcements
202110.3390/v13010074Faleye, T. O. C., E. Driver, D. Bowes, S. Adhikari, D. Adams, A. Varsani, R. U. Halden and M. ScotchPan-Enterovirus Amplicon-Based High-Throughput Sequencing Detects the Complete Capsid of a EVA71 Genotype C1 Variant via Wastewater-Based Epidemiology in ArizonaViruses
202110.1039/D0GC03597AFang, Z., M. G. Flynn, J. E. Jackson and E. L. HeggThio-assisted reductive electrolytic cleavage of lignin ?-O-4 models and authentic ligninGreen Chemistry
202110.1021/acs.est.0c04358Ferin, K. M., L. Chen, J. Zhong, S. Acquah, E. A. Heaton, M. Khanna and A. VanLoockeWater Quality Effects of Economically Viable Land Use Change in the Mississippi River Basin under the Renewable Fuel StandardEnvironmental Science & Technology
202110.1093/molbev/msaa221Foflonker, F. and C. E. Blaby-HaasColocality to Cofunctionality: Eukaryotic Gene Neighborhoods as a Resource for Function DiscoveryMolecular Biology and Evolution
202110.1016/j.copbio.2020.11.010Foster, C. J., L. Wang, H. V. Dinh, P. F. Suthers and C. D. MaranasBuilding kinetic models for metabolic engineeringCurrent Opinion in Biotechnology
202110.1371/journal.pone.0238327Gao, D., P. R. Barber, J. V. Chacko, M. A. Kader Sagar, C. T. Rueden, A. R. Grislis, M. C. Hiner and K. W. EliceiriFLIMJ: An open-source ImageJ toolkit for fluorescence lifetime image data analysisPLOS ONE
202110.1016/j.mec.2021.e00162Garcia, D. C., J. L. N. Dinglasan, H. Shrestha, P. E. Abraham, R. L. Hettich and M. J. DoktyczA lysate proteome engineering strategy for enhancing cell-free metabolite productionMetabolic Engineering Communications
202110.3390/genes12020288Guo, Z., M. Xu, H. Nagano, L. V. Clark, E. J. Sacks and T. YamadaCharacterization of the Ghd8 Flowering Time Gene in a Mini-Core Collection of Miscanthus sinensisGenes
202110.1038/s41477-021-00877-2Horton, P., S. P. Long, P. Smith, S. A. Banwart and D. J. BeerlingTechnologies to deliver food and climate security through agricultureNature Plants
202110.1016/j.micres.2020.126640Igiehon, N. O., O. O. Babalola, X. Cheseto and B. TortoEffects of rhizobia and arbuscular mycorrhizal fungi on yield, size distribution and fatty acid of soybean seeds grown under drought stressMicrobiological Research
202110.1021/acsomega.1c00997Joshi, R. P., A. McNaughton, D. G. Thomas, C. S. Henry, S. R. Canon, L. A. McCue and N. KumarQuantum Mechanical Methods Predict Accurate Thermodynamics of Biochemical ReactionsACS Omega
202110.1111/gcbb.12777Kasanke, C. P., Q. Zhao, S. Bell, A. M. Thompson and K. S. HofmockelCan switchgrass increase carbon accrual in marginal soils? The importance of site selectionGCB Bioenergy
202110.1016/j.jmb.2020.11.020Kennedy, N. W., S. P. Ikonomova, M. Slininger Lee, H. W. Raeder and D. Tullman-ErcekSelf-assembling shell proteins PduA and PduJ have essential and redundant roles in bacterial microcompartment assemblyJournal of Molecular Biology
202110.1111/ajae.12189Khanna, M., X. Chen, W. Wang and A. OliverRepeal of the Clean Power Plan: Social Cost and Distributional ImplicationsAmerican Journal of Agricultural Economics
202110.1111/gcbb.12768Kim, S. Y., R. A. Slattery and D. R. OrtA role for differential Rubisco activase isoform expression in C4 bioenergy grasses at high temperatureGCB Bioenergy
202110.1002/bit.27576Kuanyshev, N., C. V. Rao, B. Dien and Y.-S. JinDomesticating a food spoilage yeast into an organic acid-tolerant metabolic engineering host: Lactic acid production by engineered Zygosaccharomyces bailiiBiotechnology and Bioengineering
202110.1002/bbb.2212Kurambhatti, C., D. Kumar and V. SinghTechnical and economic feasibility of an integrated ethanol and anthocyanin coproduction process using purple corn stoverBiofuels, Bioproducts and Biorefining
202110.1111/omi.12323Lamont, E. I., A. Gadkari, K. A. Kerns, T. T. To, D. Daubert, G. Kotsakis, B. Bor, X. He and J. S. McLeanModified SHI medium supports growth of a disease-state subgingival polymicrobial community in vitroMolecular Oral Microbiology
202110.3390/microorganisms9020321Lee, J. A., A. C. Baugh, N. J. Shevalier, B. Strand, S. Stolyar and C. J. MarxCross-Feeding of a Toxic Metabolite in a Synthetic Lignocellulose-Degrading Microbial CommunityMicroorganisms
202110.1016/j.copbio.2020.10.012Lee, J. W., S. Yook, H. Koh, C. V. Rao and Y.-S. JinEngineering xylose metabolism in yeasts to produce biofuels and chemicalsCurrent Opinion in Biotechnology
202110.1016/j.rser.2020.110613Leibensperger, C., P. Yang, Q. Zhao, S. Wei and X. CaiThe synergy between stakeholders for cellulosic biofuel development: Perspectives, opportunities, and barriersRenewable and Sustainable Energy Reviews
202110.1146/annurev-ento-040920-061140Li, H., S. E. Young, M. Poulsen and C. R. CurrieSymbiont-Mediated Digestion of Plant Biomass in Fungus-Farming InsectsAnnual Review of Entomology
202110.1016/j.copbio.2020.09.011Liu, D., M. Liberton, J. I. Hendry, J. Aminian-Dehkordi, C. D. Maranas and H. B. PakrasiEngineering biology approaches for food and nutrient production by cyanobacteriaCurrent Opinion in Biotechnology
202110.1038/s41598-020-79733-wLiu, J., A. Cheng, M. Wang, M. Liu, D. Zhu, Q. Yang, Y. Wu, R. Jia, S. Chen, X. Zhao, S. Zhang, J. Huang, X. Ou, S. Mao, Q. Gao, X. Wen, L. Zhang, Y. Liu, Y. Yu, B. Tian, L. Pan, M. Ur Rehman and X. ChenComparative genomics and metabolomics analysis of Riemerella anatipestifer strain CH-1 and CH-2Scientific Reports
202110.1111/1758-2229.12892Lloyd, K. G.Time as a microbial resourceEnvironmental Microbiology Reports
202110.1016/j.biortech.2020.124424Maitra, S. and V. SinghBalancing sugar recovery and inhibitor generation during energycane processing: Coupling cryogenic grinding with hydrothermal pretreatment at low temperaturesBioresource Technology
202110.1128/MRA.01380-20Martin, R. M., M. Kausch, K. Yap, J. D. Wehr, G. L. Boyer and S. W. WilhelmMetagenome-Assembled Genome Sequences of Raphidiopsis raciborskii and Planktothrix agardhii from a Cyanobacterial Bloom in Kissena Lake, New York, USAMicrobiology Resource Announcements
202110.1038/s41396-020-00757-1Metcalfe, K. S., R. Murali, S. W. Mullin, S. A. Connon and V. J. OrphanExperimentally-validated correlation analysis reveals new anaerobic methane oxidation partnerships with consortium-level heterogeneity in diazotrophyThe ISME Journal
202110.1101/gr.266429.120Michael, T. P., E. Ernst, N. Hartwick, P. Chu, D. Bryant, S. Gilbert, S. Ortleb, E. L. Baggs, K. S. Sree, K. J. Appenroth, J. Fuchs, F. Jupe, J. P. Sandoval, K. V. Krasileva, L. Borisjuk, T. C. Mockler, J. R. Ecker, R. A. Martienssen and E. LamGenome and time-of-day transcriptome of Wolffia australiana link morphological minimization with gene loss and less growth controlGenome Research
202110.1111/gcbb.12788Moore, C. E., A. C. von Haden, M. B. Burnham, I. B. Kantola, C. D. Gibson, B. J. Blakely, E. C. Dracup, M. D. Masters, W. H. Yang, E. H. DeLucia and C. J. BernacchiEcosystem-scale biogeochemical fluxes from three bioenergy crop candidates: How energy sorghum compares to maize and miscanthusGCB Bioenergy
202110.1093/jxb/erab090Moore, C. E., K. Meacham-Hensold, P. Lemonnier, R. A. Slattery, C. Benjamin, C. J. Bernacchi, T. Lawson and A. P. CavanaghThe effect of increasing temperature on crop photosynthesis: from enzymes to ecosystemsJournal of Experimental Botany
202110.1016/j.watres.2020.116445Nguyen Quoc, B., S. Wei, M. Armenta, R. Bucher, P. Sukapanpotharam, D. A. Stahl, H. D. Stensel and M.-K. H. WinklerAerobic granular sludge: Impact of size distribution on nitrification capacityWater Research
202110.1111/tpj.15086Oliver, J., M. Fan, B. McKinley, S. Zemelis-Durfee, F. Brandizzi, C. Wilkerson and J. E. MulletThe AGCVIII kinase Dw2 modulates cell proliferation, endomembrane trafficking, and MLG/xylan cell wall localization in elongating stem internodes of Sorghum bicolorThe Plant Journal
202110.1007/s10533-020-00742-yOstrom, P. H., S. DeCamp, H. Gandhi, J. Haslun and N. E. OstromThe influence of tillage and fertilizer on the flux and source of nitrous oxide with reference to atmospheric variation using laser spectroscopyBiogeochemistry
202110.1007/978-1-0716-1032-9_5Pavan, M.Setting Up an Automated Biomanufacturing LaboratorySynthetic Gene Circuits
202110.1128/MRA.00002-21Podar, P. T., K. Peyton, A. Soren, R. L. Wilpiszeski, C. C. Gilmour, D. A. Elias and M. PodarComplete Genome Sequence of Desulfobulbus oligotrophicus Prop6, an Anaerobic Deltabacterota Strain That Lacks Mercury Methylation CapabilityMicrobiology Resource Announcements
202110.1016/j.electacta.2020.137326Rago, L., D. Popp, J. T. Heiker and F. HarnischElectroactive microorganisms in mouse fecesElectrochimica Acta
202110.1016/j.molcel.2020.12.031Saba, J., X. Cao and R. LandickBacterial Transcription Continues to Surprise: Activation by Alarmone-Mediated ?-Factor TetheringMolecular Cell
202110.1088/1748-9326/abd2f3Saha, D., B. Basso and G. P. RobertsonMachine learning improves predictions of agricultural nitrous oxide (N2O) emissions from intensively managed cropping systemsEnvironmental Research Letters
202110.1007/s12155-021-10272-6Schetter, A., C.-H. Lin, C. Zumpf, C. Jang, L. Hoffmann, W. Rooney and D. K. LeeGenotype-Environment-Management Interactions in Biomass Yield and Feedstock Composition of Photoperiod-Sensitive Energy SorghumBioEnergy Research
202110.1109/TMI.2020.3024264Scheufele, K., S. Subramanian and G. BirosFully Automatic Calibration of Tumor-Growth Models Using a Single mpMRI ScanIEEE Transactions on Medical Imaging
202110.1016/j.watres.2020.116571Shabtai, I. A., L. M. Lynch and Y. G. MishaelDesigning clay-polymer nanocomposite sorbents for water treatment: A review and meta-analysis of the past decadeWater Research
202110.1371/journal.pone.0245069Sim, M. S., C. T. Skennerton and V. J. OrphanPhysiological, genomic, and sulfur isotopic characterization of methanol metabolism by Desulfovibrio carbinolicusPLOS ONE
202110.1016/j.polymdegradstab.2021.109481Soulenthone, P., Y. Tachibana, M. Suzuki, T. Mizuno, Y. Ohta and K.-i. KasuyaCharacterization of a poly(butylene adipate-co-terephthalate) hydrolase from the mesophilic actinobacteria Rhodococcus fasciansPolymer Degradation and Stability
202110.1038/s41396-020-00782-0St. James, A. R., J. B. Yavitt, S. H. Zinder and R. E. RichardsonLinking microbial Sphagnum degradation and acetate mineralization in acidic peat bogs: from global insights to a genome-centric case studyThe ISME Journal
202110.1007/s00248-020-01651-1St. James, A. R., J. Lin and R. E. RichardsonRelationship Between Peat Type and Microbial Ecology in Sphagnum-Containing Peatlands of the Adirondack Mountains, NY, USAMicrobial Ecology
202110.1071/MF20024Stoessel, D. J., A. R. van Rooyen, L. B. Beheregaray, S. M. C. Raymond, B. van Wyk, J. Haddy, J. Lieschke and A. R. WeeksPopulation genetic structure of estuary perch (Percalates colonorum Gunther) in south-eastern AustraliaMarine and Freshwater Research
202110.1002/biot.202000142Sun, L. and Y.-S. JinXylose Assimilation for the Efficient Production of Biofuels and Chemicals by Engineered Saccharomyces cerevisiaeBiotechnology Journal
202110.1016/j.ymben.2020.11.013Suthers, P. F., C. J. Foster, D. Sarkar, L. Wang and C. D. MaranasRecent advances in constraint and machine learning-based metabolic modeling by leveraging stoichiometric balances, thermodynamic feasibility and kinetic law formalismsMetabolic Engineering
202110.1021/jasms.0c00251Weitz, K. K., M. L. Smith, K. K. Hixson, E. A. Hill, J. K. Jansson, K. S. Hofmockel and M. S. LiptonReal-Time Mass Spectrometry Measurements of Respiration Rates in Biological SystemsJournal of the American Society for Mass Spectrometry
202110.1128/mBio.03099-20Wilhelm, R. C., C. Pepe-Ranney, P. Weisenhorn, M. Lipton and D. H. BuckleyCompetitive Exclusion and Metabolic Dependency among Microorganisms Structure the Cellulose Economy of an Agricultural SoilmBio
202110.1128/MRA.01410-20Xavier, R. K. M., D. Xu, P. J. McCarthy, S. Yang and G. WangGenome Sequence of Streptomyces sp. Strain HB-N217, Isolated from the Marine Sponge Forcepia spMicrobiology Resource Announcements
202110.1111/gcbb.12821Yang, P., X. Cai and M. KhannaFarmers' heterogeneous perceptions of marginal land for biofuel crops in US Midwestern states considering biophysical and socioeconomic factorsGCB Bioenergy
202110.3389/fpls.2020.572137Yao, T., J. Zhang, M. Xie, G. Yuan, T. J. Tschaplinski, W. Muchero and J.-G. ChenTranscriptional Regulation of Drought Response in Arabidopsis and Woody PlantsFrontiers in Plant Science
202110.1038/s41598-020-79975-8Yu, K. M. J., B. McKinley, W. L. Rooney and J. E. MulletHigh planting density induces the expression of GA3-oxidase in leaves and GA mediated stem elongation in bioenergy sorghumScientific Reports
202110.1093/plphys/kiaa109Yu, X.-H., Y. Cai, J. Keereetaweep, K. Wei, J. Chai, E. Deng, H. Liu and J. ShanklinBiotin attachment domain-containing proteins mediate hydroxy fatty acid-dependent inhibition of acetyl CoA carboxylasePlant Physiology
202110.1021/acscatal.0c05393Yun, D., E. Z. Ayla, D. T. Bregante and D. W. FlahertyReactive Species and Reaction Pathways for the Oxidative Cleavage of 4-Octene and Oleic Acid with H2O2 over Tungsten Oxide CatalystsACS Catalysis
202110.1016/j.copbio.2021.01.013Zaramela, L. S., O. Moyne, M. Kumar, C. Zuniga, J. D. Tibocha-Bonilla and K. ZenglerThe sum is greater than the parts: exploiting microbial communities to achieve complex functionsCurrent Opinion in Biotechnology
202110.1002/cbic.202000616Zegeye, E. K., N. C. Sadler, G. X. Lomas, I. K. Attah, J. K. Jansson, K. S. Hofmockel, C. R. Anderton and A. T. WrightActivity-Based Protein Profiling of Chitin CatabolismChemBioChem
202110.3390/plants10030513Zhai, Z., H. Liu and J. ShanklinEctopic Expression of OLEOSIN 1 and Inactivation of GBSS1 Have a Synergistic Effect on Oil Accumulation in Plant LeavesPlants
202010.1093/treephys/tpz020Abbas, M., I. Peszlen, R. Shi, H. Kim, R. Katahira, K. Kafle, Z. Xiang, X. Huang, D. Min, M. Mohamadamin, C. Yang, X. Dai, X. Yan, S. Park, Y. Li, S. H. Kim, M. Davis, J. Ralph, R. R. Sederoff, V. L. Chiang and Q. LiInvolvement of CesA4, CesA7-A/B and CesA8-A/B in secondary wall formation in Populus trichocarpa woodTree Physiology
202010.3390/ijms21030772Abdel-Ghany, S. E., F. Ullah, A. Ben-Hur and A. S. ReddyTranscriptome analysis of drought-resistant and drought-sensitive sorghum (Sorghum bicolor) genotypes in response to PEG-Induced drought stressInternational Journal of Molecular Sciences
202010.1016/j.ymben.2020.07.008Abdel-Mawgoud, A. M. and G. StephanopoulosImproving CRISPR/Cas9-mediated genome editing efficiency in Yarrowia lipolytica using direct tRNA-sgRNA fusionsMetabolic Engineering
202010.1002/pmic.202000067Abraham, P. E., A. Matthiadis, R. L. Hettich and U. C. KalluriMolecular Remodeling in Populus PdKOR RNAi Roots Profiled Using LC-MS/MS ProteomicsPROTEOMICS
202010.1371/journal.pone.0228560Acosta, K., J. Xu, S. Gilbert, E. Denison, T. Brinkman, S. Lebeis and E. LamDuckweed hosts a taxonomically similar bacterial assemblage as the terrestrial leaf microbiomePLOS ONE
202010.1111/1462-2920.15192Aigle, A., C. Gubry-Rangin, C. Thion, K. Y. Estera-Molina, H. Richmond, J. Pett-Ridge, M. K. Firestone, G. W. Nicol and J. I. ProsserExperimental testing of hypotheses for temperature- and pH-based niche specialization of ammonia oxidizing archaea and bacteriaEnvironmental Microbiology
202010.1016/j.xcrm.2020.100077Alcon-Giner, C., M. J. Dalby, S. Caim, J. Ketskemety, A. Shaw, K. Sim, M. A. E. Lawson, R. Kiu, C. Leclaire, L. Chalklen, M. Kujawska, S. Mitra, F. Fardus-Reid, G. Belteki, K. McColl, J. R. Swann, J. S. Kroll, P. Clarke and L. J. HallMicrobiota Supplementation with Bifidobacterium and Lactobacillus Modifies the Preterm Infant Gut Microbiota and Metabolome: An Observational StudyCell Reports Medicine
202010.1186/s12870-020-2305-xAlexandersson, E., S. Kushwaha, A. Subedi, D. Weighill, S. Climer, D. Jacobson and E. AndreassonLinking crop traits to transcriptome differences in a progeny population of tetraploid potatoBMC Plant Biology
202010.1016/j.copbio.2019.11.003Allen, D. K. and J. D. YoungTracing metabolic flux through time and space with isotope labeling experimentsCurr Opin Biotechnol
202010.1111/gcb.15053Alster, C. J., J. C. von Fischer, S. D. Allison and K. K. TresederEmbracing a new paradigm for temperature sensitivity of soil microbesGlobal Change Biology
202010.3389/feart.2020.557961AminiTabrizi, R., R. M. Wilson, J. D. Fudyma, S. B. Hodgkins, H. M. Heyman, V. I. Rich, S. R. Saleska, J. P. Chanton and M. M. TfailyControls on Soil Organic Matter Degradation and Subsequent Greenhouse Gas Emissions Across a Permafrost Thaw Gradient in Northern SwedenFrontiers in Earth Science
202010.1016/j.cell.2020.04.046Anava, S., M. Neuhof, H. Gingold, O. Sagy, A. Munters, E. M. Svensson, E. Afshinnekoo, D. Danko, J. Foox, P. Shor, B. Riestra, D. Huchon, C. E. Mason, N. Mizrahi, M. Jakobsson and O. RechaviIlluminating Genetic Mysteries of the Dead Sea ScrollsCell
202010.1089/ast.2020.2313Angelos, E., D. K. Ko, S. Zemelis-Durfee and F. BrandizziRelevance of the unfolded protein response to spaceflight-induced transcriptional reprogramming in ArabidopsisAstrobiology
202010.1038/s41467-020-18677-1Angenent-Mari, N. M., A. S. Garruss, L. R. Soenksen, G. Church and J. J. CollinsA deep learning approach to programmable RNA switchesNature Communications
202010.1021/acs.chemrev.9b00717Anson, C. W. and S. S. StahlMediated Fuel Cells: Soluble Redox Mediators and Their Applications to Electrochemical Reduction of O2 and Oxidation of H2, Alcohols, Biomass, and Complex FuelsChemical Reviews
202010.1016/j.apenergy.2020.115933Arora, A. and V. SinghBiodiesel production from engineered sugarcane lipids under uncertain feedstock compositions: Process design and techno-economic analysisApplied Energy
202010.1038/s41598-020-75170-xAyangbenro, A. S. and O. O. BabalolaGenomic analysis of Bacillus cereus NWUAB01 and its heavy metal removal from polluted soilScientific Reports
202010.1093/nargab/lqaa049Azodi, C. B., J. P. Lloyd and S.-H. ShiuThe cis-regulatory codes of response to combined heat and drought stress in Arabidopsis thalianaNAR Genomics and Bioinformatics
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