Research Publications
This bibliography contains publications from research funded by the Genomic Science Program. Most publications are from FY 2021 and beyond, though older publications appear in some cases. If you are a GSP-funded researcher and don’t see your publications listed below, contact Marissa Mills (millsmd@ornl.gov) to get your publications added.
Year | DOI | Authors | Title | Journal |
---|---|---|---|---|
2021 | 10.1016/j.bbrc.2021.02.046 | Abdelhamid, A. G. and N. K. El-Dougdoug | Comparative genomics of the gut commensal Bifidobacterium bifidum reveals adaptation to carbohydrate utilization | Biochemical and Biophysical Research Communications |
2021 | 10.21203/rs.3.rs-23478/v1 | Anne Elizabeth, H.-W., M.-S. David, A. Chanaka Roshan, D. Crissa, H. Kathleen, A. T. Gerald, S. Brian, P. D. Stephen and F. D. Mark | Accurate Determination of Genotypic Variance of Cell Wall Characteristics of a Populus trichocarpa Pedigree Using High-Throughput Pyrolysis-Molecular Beam Mass Spectrometry | Biotechnology for Biofuels |
2021 | 10.1128/MRA.01411-20 | Ateba, T. P., K. A. Alayande and M. Mwanza | Metagenomes and Assembled Genomes from Diarrhea-Affected Cattle (Bos taurus) | Microbiology Resource Announcements |
2021 | 10.1016/j.rhisph.2021.100342 | Babalola, O. O., O. A. Fasusi, A. E. Amoo and A. S. Ayangbenro | Genomic analysis of a Pseudomonas strain with multiple plant growth promoting properties | Rhizosphere |
2021 | 10.1128/MRA.00029-21 | Babalola, O. O., O. A. Fasusi, A. E. Amoo and A. S. Ayangbenro | Draft Genomic Analysis of Pseudomonas sp. Strain OA3, a Potential Plant Growth-Promoting Rhizospheric Bacterium | Microbiology Resource Announcements |
2021 | 10.1128/MRA.00954-20 | Babalola, O. O., R. R. Molefe and A. E. Amoo | Metagenome Assembly and Metagenome-Assembled Genome Sequences from the Rhizosphere of Maize Plants in Mafikeng, South Africa | Microbiology Resource Announcements |
2021 | 10.1016/j.scitotenv.2020.144429 | Bhatia, S. K., S. S. Jagtap, A. A. Bedekar, R. K. Bhatia, K. Rajendran, A. Pugazhendhi, C. V. Rao, A. E. Atabani, G. Kumar and Y.-H. Yang | Renewable biohydrogen production from lignocellulosic biomass using fermentation and integration of systems with other energy generation technologies | Science of The Total Environment |
2021 | 10.1128/MRA.00884-20 | Bhattacharjee, A., L. N. Anderson, T. Alfaro, A. Porras-Alfaro, A. Jumpponen, K. S. Hofmockel, J. K. Jansson, C. R. Anderton and W. C. Nelson | Draft Genome Sequence of Fusarium sp. Strain DS 682, a Novel Fungal Isolate from the Grass Rhizosphere | Microbiology Resource Announcements |
2021 | 10.1186/s40168-020-00983-x | Blaustein, R. A., L.-M. Michelitsch, A. J. Glawe, H. Lee, S. Huttelmaier, N. Hellgeth, S. Ben Maamar and E. M. Hartmann | Toothbrush microbiomes feature a meeting ground for human oral and environmental microbiota | Microbiome |
2021 | 10.1128/MRA.01485-20 | Borre, I. and E. C. Sonnenschein | Draft Genome Sequences of Nine Environmental Bacterial Isolates Colonizing Plastic | Microbiology Resource Announcements |
2021 | 10.1128/MRA.01427-20 | Bridges, C. M., M. C. Nelson, J. Graf and D. J. Gage | Draft Genome Sequences of Dysgonomonas sp. Strains BGC7 and HGC4, Isolated from the Hindgut of a Lower Termite | Microbiology Resource Announcements |
2021 | 10.1016/j.jpdc.2020.11.006 | Brunn, M., N. Himthani, G. Biros, M. Mehl and A. Mang | Fast GPU 3D diffeomorphic image registration | Journal of Parallel and Distributed Computing |
2021 | 10.1073/pnas.2022982118 | Busta, L., E. Schmitz, D. K. Kosma, J. C. Schnable and E. B. Cahoon | A co-opted steroid synthesis gene, maintained in sorghum but not maize, is associated with a divergence in leaf wax chemistry | Proceedings of the National Academy of Sciences |
2021 | 10.1137/19M129961X | Chen, C., S. Reiz, C. D. Yu, H.-J. Bungartz and G. Biros | Fast Approximation of the Gauss--Newton Hessian Matrix for the Multilayer Perceptron | SIAM Journal on Matrix Analysis and Applications |
2021 | 10.1088/1748-9326/abd7af | Chen, L., D. Debnath, J. Zhong, K. Ferin, A. VanLoocke and M. Khanna | The economic and environmental costs and benefits of the renewable fuel standard | Environmental Research Letters |
2021 | 10.1021/acs.est.0c06133 | Chen, L., E. Blanc-Betes, T. W. Hudiburg, D. Hellerstein, S. Wallander, E. H. DeLucia and M. Khanna | Assessing the Returns to Land and Greenhouse Gas Savings from Producing Energy Crops on Conservation Reserve Program Land | Environmental Science & Technology |
2021 | 10.1002/jrs.6056 | Cupil-Garcia, V., P. Strobbia, B. M. Crawford, H.-N. Wang, H. Ngo, Y. Liu and T. Vo-Dinh | Plasmonic nanoplatforms: From surface-enhanced Raman scattering sensing to biomedical applications | Journal of Raman Spectroscopy |
2021 | 10.1007/s11120-020-00806-y | Dahlgren, K. K., C. Gates, T. Lee and J. C. Cameron | Proximity-based proteomics reveals the thylakoid lumen proteome in the cyanobacterium Synechococcus sp. PCC 7002 | Photosynthesis Research |
2021 | 10.1016/j.agee.2020.107150 | De Antoni Migliorati, M., W. J. Parton, M. J. Bell, W. Wang and P. R. Grace | Soybean fallow and nitrification inhibitors: Strategies to reduce N2O emission intensities and N losses in Australian sugarcane cropping systems | Agriculture, Ecosystems & Environment |
2021 | 10.1111/pce.13872 | Ding, N., R. Huertas, I. Torres-Jerez, W. Liu, B. Watson, W.-R. Scheible and M. Udvardi | Transcriptional, metabolic, physiological and developmental responses of switchgrass to phosphorus limitation | Plant, Cell & Environment |
2021 | 10.1039/D0AN02022B | Do, H., S.-R. Kwon, S. Baek, C. S. Madukoma, M. K. Smiley, L. E. Dietrich, J. D. Shrout and P. W. Bohn | Redox cycling-based detection of phenazine metabolites secreted from Pseudomonas aeruginosa in nanopore electrode arrays | Analyst |
2021 | 10.1093/femsyr/foab002 | Domenzain, I., F. Li, E. J. Kerkhoven and V. Siewers | Evaluating accessibility, usability and interoperability of genome-scale metabolic models for diverse yeasts species | FEMS Yeast Research |
2021 | 10.1371/journal.pone.0240390 | Dong, H., L. V. Clark, X. Jin, K. Anzoua, L. Bagmet, P. Chebukin, E. Dzyubenko, N. Dzyubenko, B. K. Ghimire, K. Heo, D. A. Johnson, H. Nagano, A. Sabitov, J. Peng, T. Yamada, J. H. Yoo, C. Y. Yu, H. Zhao, S. P. Long and E. J. Sacks | Managing flowering time in Miscanthus and sugarcane to facilitate intra- and intergeneric crosses | PLOS ONE |
2021 | 10.1128/MRA.00864-20 | Doyle, D. A., K. E. Duncan and R. S. Tanner | Genome Sequence of Clostridium sp. Strain P21, a CO-Fermenting Acetogen Isolated from Old Hay | Microbiology Resource Announcements |
2021 | 10.3390/v13010074 | Faleye, T. O. C., E. Driver, D. Bowes, S. Adhikari, D. Adams, A. Varsani, R. U. Halden and M. Scotch | Pan-Enterovirus Amplicon-Based High-Throughput Sequencing Detects the Complete Capsid of a EVA71 Genotype C1 Variant via Wastewater-Based Epidemiology in Arizona | Viruses |
2021 | 10.1039/D0GC03597A | Fang, Z., M. G. Flynn, J. E. Jackson and E. L. Hegg | Thio-assisted reductive electrolytic cleavage of lignin ?-O-4 models and authentic lignin | Green Chemistry |
2021 | 10.1021/acs.est.0c04358 | Ferin, K. M., L. Chen, J. Zhong, S. Acquah, E. A. Heaton, M. Khanna and A. VanLoocke | Water Quality Effects of Economically Viable Land Use Change in the Mississippi River Basin under the Renewable Fuel Standard | Environmental Science & Technology |
2021 | 10.1093/molbev/msaa221 | Foflonker, F. and C. E. Blaby-Haas | Colocality to Cofunctionality: Eukaryotic Gene Neighborhoods as a Resource for Function Discovery | Molecular Biology and Evolution |
2021 | 10.1016/j.copbio.2020.11.010 | Foster, C. J., L. Wang, H. V. Dinh, P. F. Suthers and C. D. Maranas | Building kinetic models for metabolic engineering | Current Opinion in Biotechnology |
2021 | 10.1371/journal.pone.0238327 | Gao, D., P. R. Barber, J. V. Chacko, M. A. Kader Sagar, C. T. Rueden, A. R. Grislis, M. C. Hiner and K. W. Eliceiri | FLIMJ: An open-source ImageJ toolkit for fluorescence lifetime image data analysis | PLOS ONE |
2021 | 10.1016/j.mec.2021.e00162 | Garcia, D. C., J. L. N. Dinglasan, H. Shrestha, P. E. Abraham, R. L. Hettich and M. J. Doktycz | A lysate proteome engineering strategy for enhancing cell-free metabolite production | Metabolic Engineering Communications |
2021 | 10.3390/genes12020288 | Guo, Z., M. Xu, H. Nagano, L. V. Clark, E. J. Sacks and T. Yamada | Characterization of the Ghd8 Flowering Time Gene in a Mini-Core Collection of Miscanthus sinensis | Genes |
2021 | 10.1038/s41477-021-00877-2 | Horton, P., S. P. Long, P. Smith, S. A. Banwart and D. J. Beerling | Technologies to deliver food and climate security through agriculture | Nature Plants |
2021 | 10.1016/j.micres.2020.126640 | Igiehon, N. O., O. O. Babalola, X. Cheseto and B. Torto | Effects of rhizobia and arbuscular mycorrhizal fungi on yield, size distribution and fatty acid of soybean seeds grown under drought stress | Microbiological Research |
2021 | 10.1021/acsomega.1c00997 | Joshi, R. P., A. McNaughton, D. G. Thomas, C. S. Henry, S. R. Canon, L. A. McCue and N. Kumar | Quantum Mechanical Methods Predict Accurate Thermodynamics of Biochemical Reactions | ACS Omega |
2021 | 10.1111/gcbb.12777 | Kasanke, C. P., Q. Zhao, S. Bell, A. M. Thompson and K. S. Hofmockel | Can switchgrass increase carbon accrual in marginal soils? The importance of site selection | GCB Bioenergy |
2021 | 10.1016/j.jmb.2020.11.020 | Kennedy, N. W., S. P. Ikonomova, M. Slininger Lee, H. W. Raeder and D. Tullman-Ercek | Self-assembling shell proteins PduA and PduJ have essential and redundant roles in bacterial microcompartment assembly | Journal of Molecular Biology |
2021 | 10.1111/ajae.12189 | Khanna, M., X. Chen, W. Wang and A. Oliver | Repeal of the Clean Power Plan: Social Cost and Distributional Implications | American Journal of Agricultural Economics |
2021 | 10.1111/gcbb.12768 | Kim, S. Y., R. A. Slattery and D. R. Ort | A role for differential Rubisco activase isoform expression in C4 bioenergy grasses at high temperature | GCB Bioenergy |
2021 | 10.1002/bit.27576 | Kuanyshev, N., C. V. Rao, B. Dien and Y.-S. Jin | Domesticating a food spoilage yeast into an organic acid-tolerant metabolic engineering host: Lactic acid production by engineered Zygosaccharomyces bailii | Biotechnology and Bioengineering |
2021 | 10.1002/bbb.2212 | Kurambhatti, C., D. Kumar and V. Singh | Technical and economic feasibility of an integrated ethanol and anthocyanin coproduction process using purple corn stover | Biofuels, Bioproducts and Biorefining |
2021 | 10.1111/omi.12323 | Lamont, E. I., A. Gadkari, K. A. Kerns, T. T. To, D. Daubert, G. Kotsakis, B. Bor, X. He and J. S. McLean | Modified SHI medium supports growth of a disease-state subgingival polymicrobial community in vitro | Molecular Oral Microbiology |
2021 | 10.3390/microorganisms9020321 | Lee, J. A., A. C. Baugh, N. J. Shevalier, B. Strand, S. Stolyar and C. J. Marx | Cross-Feeding of a Toxic Metabolite in a Synthetic Lignocellulose-Degrading Microbial Community | Microorganisms |
2021 | 10.1016/j.copbio.2020.10.012 | Lee, J. W., S. Yook, H. Koh, C. V. Rao and Y.-S. Jin | Engineering xylose metabolism in yeasts to produce biofuels and chemicals | Current Opinion in Biotechnology |
2021 | 10.1016/j.rser.2020.110613 | Leibensperger, C., P. Yang, Q. Zhao, S. Wei and X. Cai | The synergy between stakeholders for cellulosic biofuel development: Perspectives, opportunities, and barriers | Renewable and Sustainable Energy Reviews |
2021 | 10.1146/annurev-ento-040920-061140 | Li, H., S. E. Young, M. Poulsen and C. R. Currie | Symbiont-Mediated Digestion of Plant Biomass in Fungus-Farming Insects | Annual Review of Entomology |
2021 | 10.1016/j.copbio.2020.09.011 | Liu, D., M. Liberton, J. I. Hendry, J. Aminian-Dehkordi, C. D. Maranas and H. B. Pakrasi | Engineering biology approaches for food and nutrient production by cyanobacteria | Current Opinion in Biotechnology |
2021 | 10.1038/s41598-020-79733-w | Liu, J., A. Cheng, M. Wang, M. Liu, D. Zhu, Q. Yang, Y. Wu, R. Jia, S. Chen, X. Zhao, S. Zhang, J. Huang, X. Ou, S. Mao, Q. Gao, X. Wen, L. Zhang, Y. Liu, Y. Yu, B. Tian, L. Pan, M. Ur Rehman and X. Chen | Comparative genomics and metabolomics analysis of Riemerella anatipestifer strain CH-1 and CH-2 | Scientific Reports |
2021 | 10.1111/1758-2229.12892 | Lloyd, K. G. | Time as a microbial resource | Environmental Microbiology Reports |
2021 | 10.1016/j.biortech.2020.124424 | Maitra, S. and V. Singh | Balancing sugar recovery and inhibitor generation during energycane processing: Coupling cryogenic grinding with hydrothermal pretreatment at low temperatures | Bioresource Technology |
2021 | 10.1128/MRA.01380-20 | Martin, R. M., M. Kausch, K. Yap, J. D. Wehr, G. L. Boyer and S. W. Wilhelm | Metagenome-Assembled Genome Sequences of Raphidiopsis raciborskii and Planktothrix agardhii from a Cyanobacterial Bloom in Kissena Lake, New York, USA | Microbiology Resource Announcements |
2021 | 10.1038/s41396-020-00757-1 | Metcalfe, K. S., R. Murali, S. W. Mullin, S. A. Connon and V. J. Orphan | Experimentally-validated correlation analysis reveals new anaerobic methane oxidation partnerships with consortium-level heterogeneity in diazotrophy | The ISME Journal |
2021 | 10.1101/gr.266429.120 | Michael, T. P., E. Ernst, N. Hartwick, P. Chu, D. Bryant, S. Gilbert, S. Ortleb, E. L. Baggs, K. S. Sree, K. J. Appenroth, J. Fuchs, F. Jupe, J. P. Sandoval, K. V. Krasileva, L. Borisjuk, T. C. Mockler, J. R. Ecker, R. A. Martienssen and E. Lam | Genome and time-of-day transcriptome of Wolffia australiana link morphological minimization with gene loss and less growth control | Genome Research |
2021 | 10.1111/gcbb.12788 | Moore, C. E., A. C. von Haden, M. B. Burnham, I. B. Kantola, C. D. Gibson, B. J. Blakely, E. C. Dracup, M. D. Masters, W. H. Yang, E. H. DeLucia and C. J. Bernacchi | Ecosystem-scale biogeochemical fluxes from three bioenergy crop candidates: How energy sorghum compares to maize and miscanthus | GCB Bioenergy |
2021 | 10.1093/jxb/erab090 | Moore, C. E., K. Meacham-Hensold, P. Lemonnier, R. A. Slattery, C. Benjamin, C. J. Bernacchi, T. Lawson and A. P. Cavanagh | The effect of increasing temperature on crop photosynthesis: from enzymes to ecosystems | Journal of Experimental Botany |
2021 | 10.1016/j.watres.2020.116445 | Nguyen Quoc, B., S. Wei, M. Armenta, R. Bucher, P. Sukapanpotharam, D. A. Stahl, H. D. Stensel and M.-K. H. Winkler | Aerobic granular sludge: Impact of size distribution on nitrification capacity | Water Research |
2021 | 10.1111/tpj.15086 | Oliver, J., M. Fan, B. McKinley, S. Zemelis-Durfee, F. Brandizzi, C. Wilkerson and J. E. Mullet | The AGCVIII kinase Dw2 modulates cell proliferation, endomembrane trafficking, and MLG/xylan cell wall localization in elongating stem internodes of Sorghum bicolor | The Plant Journal |
2021 | 10.1007/s10533-020-00742-y | Ostrom, P. H., S. DeCamp, H. Gandhi, J. Haslun and N. E. Ostrom | The influence of tillage and fertilizer on the flux and source of nitrous oxide with reference to atmospheric variation using laser spectroscopy | Biogeochemistry |
2021 | 10.1007/978-1-0716-1032-9_5 | Pavan, M. | Setting Up an Automated Biomanufacturing Laboratory | Synthetic Gene Circuits |
2021 | 10.1128/MRA.00002-21 | Podar, P. T., K. Peyton, A. Soren, R. L. Wilpiszeski, C. C. Gilmour, D. A. Elias and M. Podar | Complete Genome Sequence of Desulfobulbus oligotrophicus Prop6, an Anaerobic Deltabacterota Strain That Lacks Mercury Methylation Capability | Microbiology Resource Announcements |
2021 | 10.1016/j.electacta.2020.137326 | Rago, L., D. Popp, J. T. Heiker and F. Harnisch | Electroactive microorganisms in mouse feces | Electrochimica Acta |
2021 | 10.1016/j.molcel.2020.12.031 | Saba, J., X. Cao and R. Landick | Bacterial Transcription Continues to Surprise: Activation by Alarmone-Mediated ?-Factor Tethering | Molecular Cell |
2021 | 10.1088/1748-9326/abd2f3 | Saha, D., B. Basso and G. P. Robertson | Machine learning improves predictions of agricultural nitrous oxide (N2O) emissions from intensively managed cropping systems | Environmental Research Letters |
2021 | 10.1007/s12155-021-10272-6 | Schetter, A., C.-H. Lin, C. Zumpf, C. Jang, L. Hoffmann, W. Rooney and D. K. Lee | Genotype-Environment-Management Interactions in Biomass Yield and Feedstock Composition of Photoperiod-Sensitive Energy Sorghum | BioEnergy Research |
2021 | 10.1109/TMI.2020.3024264 | Scheufele, K., S. Subramanian and G. Biros | Fully Automatic Calibration of Tumor-Growth Models Using a Single mpMRI Scan | IEEE Transactions on Medical Imaging |
2021 | 10.1016/j.watres.2020.116571 | Shabtai, I. A., L. M. Lynch and Y. G. Mishael | Designing clay-polymer nanocomposite sorbents for water treatment: A review and meta-analysis of the past decade | Water Research |
2021 | 10.1371/journal.pone.0245069 | Sim, M. S., C. T. Skennerton and V. J. Orphan | Physiological, genomic, and sulfur isotopic characterization of methanol metabolism by Desulfovibrio carbinolicus | PLOS ONE |
2021 | 10.1016/j.polymdegradstab.2021.109481 | Soulenthone, P., Y. Tachibana, M. Suzuki, T. Mizuno, Y. Ohta and K.-i. Kasuya | Characterization of a poly(butylene adipate-co-terephthalate) hydrolase from the mesophilic actinobacteria Rhodococcus fascians | Polymer Degradation and Stability |
2021 | 10.1038/s41396-020-00782-0 | St. James, A. R., J. B. Yavitt, S. H. Zinder and R. E. Richardson | Linking microbial Sphagnum degradation and acetate mineralization in acidic peat bogs: from global insights to a genome-centric case study | The ISME Journal |
2021 | 10.1007/s00248-020-01651-1 | St. James, A. R., J. Lin and R. E. Richardson | Relationship Between Peat Type and Microbial Ecology in Sphagnum-Containing Peatlands of the Adirondack Mountains, NY, USA | Microbial Ecology |
2021 | 10.1071/MF20024 | Stoessel, D. J., A. R. van Rooyen, L. B. Beheregaray, S. M. C. Raymond, B. van Wyk, J. Haddy, J. Lieschke and A. R. Weeks | Population genetic structure of estuary perch (Percalates colonorum Gunther) in south-eastern Australia | Marine and Freshwater Research |
2021 | 10.1002/biot.202000142 | Sun, L. and Y.-S. Jin | Xylose Assimilation for the Efficient Production of Biofuels and Chemicals by Engineered Saccharomyces cerevisiae | Biotechnology Journal |
2021 | 10.1016/j.ymben.2020.11.013 | Suthers, P. F., C. J. Foster, D. Sarkar, L. Wang and C. D. Maranas | Recent advances in constraint and machine learning-based metabolic modeling by leveraging stoichiometric balances, thermodynamic feasibility and kinetic law formalisms | Metabolic Engineering |
2021 | 10.1021/jasms.0c00251 | Weitz, K. K., M. L. Smith, K. K. Hixson, E. A. Hill, J. K. Jansson, K. S. Hofmockel and M. S. Lipton | Real-Time Mass Spectrometry Measurements of Respiration Rates in Biological Systems | Journal of the American Society for Mass Spectrometry |
2021 | 10.1128/mBio.03099-20 | Wilhelm, R. C., C. Pepe-Ranney, P. Weisenhorn, M. Lipton and D. H. Buckley | Competitive Exclusion and Metabolic Dependency among Microorganisms Structure the Cellulose Economy of an Agricultural Soil | mBio |
2021 | 10.1128/MRA.01410-20 | Xavier, R. K. M., D. Xu, P. J. McCarthy, S. Yang and G. Wang | Genome Sequence of Streptomyces sp. Strain HB-N217, Isolated from the Marine Sponge Forcepia sp | Microbiology Resource Announcements |
2021 | 10.1111/gcbb.12821 | Yang, P., X. Cai and M. Khanna | Farmers' heterogeneous perceptions of marginal land for biofuel crops in US Midwestern states considering biophysical and socioeconomic factors | GCB Bioenergy |
2021 | 10.3389/fpls.2020.572137 | Yao, T., J. Zhang, M. Xie, G. Yuan, T. J. Tschaplinski, W. Muchero and J.-G. Chen | Transcriptional Regulation of Drought Response in Arabidopsis and Woody Plants | Frontiers in Plant Science |
2021 | 10.1038/s41598-020-79975-8 | Yu, K. M. J., B. McKinley, W. L. Rooney and J. E. Mullet | High planting density induces the expression of GA3-oxidase in leaves and GA mediated stem elongation in bioenergy sorghum | Scientific Reports |
2021 | 10.1093/plphys/kiaa109 | Yu, X.-H., Y. Cai, J. Keereetaweep, K. Wei, J. Chai, E. Deng, H. Liu and J. Shanklin | Biotin attachment domain-containing proteins mediate hydroxy fatty acid-dependent inhibition of acetyl CoA carboxylase | Plant Physiology |
2021 | 10.1021/acscatal.0c05393 | Yun, D., E. Z. Ayla, D. T. Bregante and D. W. Flaherty | Reactive Species and Reaction Pathways for the Oxidative Cleavage of 4-Octene and Oleic Acid with H2O2 over Tungsten Oxide Catalysts | ACS Catalysis |
2021 | 10.1016/j.copbio.2021.01.013 | Zaramela, L. S., O. Moyne, M. Kumar, C. Zuniga, J. D. Tibocha-Bonilla and K. Zengler | The sum is greater than the parts: exploiting microbial communities to achieve complex functions | Current Opinion in Biotechnology |
2021 | 10.1002/cbic.202000616 | Zegeye, E. K., N. C. Sadler, G. X. Lomas, I. K. Attah, J. K. Jansson, K. S. Hofmockel, C. R. Anderton and A. T. Wright | Activity-Based Protein Profiling of Chitin Catabolism | ChemBioChem |
2021 | 10.3390/plants10030513 | Zhai, Z., H. Liu and J. Shanklin | Ectopic Expression of OLEOSIN 1 and Inactivation of GBSS1 Have a Synergistic Effect on Oil Accumulation in Plant Leaves | Plants |
2020 | 10.1093/treephys/tpz020 | Abbas, M., I. Peszlen, R. Shi, H. Kim, R. Katahira, K. Kafle, Z. Xiang, X. Huang, D. Min, M. Mohamadamin, C. Yang, X. Dai, X. Yan, S. Park, Y. Li, S. H. Kim, M. Davis, J. Ralph, R. R. Sederoff, V. L. Chiang and Q. Li | Involvement of CesA4, CesA7-A/B and CesA8-A/B in secondary wall formation in Populus trichocarpa wood | Tree Physiology |
2020 | 10.3390/ijms21030772 | Abdel-Ghany, S. E., F. Ullah, A. Ben-Hur and A. S. Reddy | Transcriptome analysis of drought-resistant and drought-sensitive sorghum (Sorghum bicolor) genotypes in response to PEG-Induced drought stress | International Journal of Molecular Sciences |
2020 | 10.1016/j.ymben.2020.07.008 | Abdel-Mawgoud, A. M. and G. Stephanopoulos | Improving CRISPR/Cas9-mediated genome editing efficiency in Yarrowia lipolytica using direct tRNA-sgRNA fusions | Metabolic Engineering |
2020 | 10.1002/pmic.202000067 | Abraham, P. E., A. Matthiadis, R. L. Hettich and U. C. Kalluri | Molecular Remodeling in Populus PdKOR RNAi Roots Profiled Using LC-MS/MS Proteomics | PROTEOMICS |
2020 | 10.1371/journal.pone.0228560 | Acosta, K., J. Xu, S. Gilbert, E. Denison, T. Brinkman, S. Lebeis and E. Lam | Duckweed hosts a taxonomically similar bacterial assemblage as the terrestrial leaf microbiome | PLOS ONE |
2020 | 10.1111/1462-2920.15192 | Aigle, A., C. Gubry-Rangin, C. Thion, K. Y. Estera-Molina, H. Richmond, J. Pett-Ridge, M. K. Firestone, G. W. Nicol and J. I. Prosser | Experimental testing of hypotheses for temperature- and pH-based niche specialization of ammonia oxidizing archaea and bacteria | Environmental Microbiology |
2020 | 10.1016/j.xcrm.2020.100077 | Alcon-Giner, C., M. J. Dalby, S. Caim, J. Ketskemety, A. Shaw, K. Sim, M. A. E. Lawson, R. Kiu, C. Leclaire, L. Chalklen, M. Kujawska, S. Mitra, F. Fardus-Reid, G. Belteki, K. McColl, J. R. Swann, J. S. Kroll, P. Clarke and L. J. Hall | Microbiota Supplementation with Bifidobacterium and Lactobacillus Modifies the Preterm Infant Gut Microbiota and Metabolome: An Observational Study | Cell Reports Medicine |
2020 | 10.1186/s12870-020-2305-x | Alexandersson, E., S. Kushwaha, A. Subedi, D. Weighill, S. Climer, D. Jacobson and E. Andreasson | Linking crop traits to transcriptome differences in a progeny population of tetraploid potato | BMC Plant Biology |
2020 | 10.1016/j.copbio.2019.11.003 | Allen, D. K. and J. D. Young | Tracing metabolic flux through time and space with isotope labeling experiments | Curr Opin Biotechnol |
2020 | 10.1111/gcb.15053 | Alster, C. J., J. C. von Fischer, S. D. Allison and K. K. Treseder | Embracing a new paradigm for temperature sensitivity of soil microbes | Global Change Biology |
2020 | 10.3389/feart.2020.557961 | AminiTabrizi, R., R. M. Wilson, J. D. Fudyma, S. B. Hodgkins, H. M. Heyman, V. I. Rich, S. R. Saleska, J. P. Chanton and M. M. Tfaily | Controls on Soil Organic Matter Degradation and Subsequent Greenhouse Gas Emissions Across a Permafrost Thaw Gradient in Northern Sweden | Frontiers in Earth Science |
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